yEd Graph Editor
Design
Draw graphs and let automatic layouts arrange their connections
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Full sizeAbout Graphviz
Graphviz renders graphs described with nodes, edges and attributes, typically in the DOT language. Start by drawing a small dependency graph and try a layout that matches the kind of relationships you want readers to see. It fits technical diagrams generated from data or checked into a repository, where hand-positioning each node would be slow. Automatic layouts still need useful labels and decisions about what to include. Check which output format works in your documentation or presentation. If the graph becomes hard to read at realistic size, group elements or generate several diagrams around specific questions.
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